Population genetic structure of the parasitic nematode Spirocerca lupi in South Africa

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dc.contributor.author Greeff, Jacobus Maree
dc.contributor.author Reid, Kerry
dc.contributor.author Gagjee, Janishtha R.
dc.contributor.author Clift, Sarah Jane
dc.contributor.author De Waal, Pamela Jean
dc.date.accessioned 2018-08-28T10:01:07Z
dc.date.issued 2018-07
dc.description Supplementary data S1: Excel file of data. en_ZA
dc.description Supplementary text: The use and meaning of F-statistics. en_ZA
dc.description.abstract Spirocerca lupi is a parasitic nematode of canids and occurs in most tropical and subtropical regions around the world. While its life cycle is well known, insight is lacking about its mating structure within-hosts, genetic variability and long-distance dispersal ability. These characteristics contribute significantly to the dynamics and spread of potential resistance genes, which impacts on the control of S. lupi. To evaluate the population structure and infer potential mating behaviour of S. lupi, we genotyped 130 samples at nine microsatellite loci from three geographical locations in South Africa, between 600 and 1000 km apart. These loci identified unique individuals with high levels of polymorphism suggesting that these are not newly established S. lupi populations in South Africa and that effective population sizes must be large. Population genetic analyses showed that populations are not very distinct, that worms within dogs are more similar to each other than random worms from each population, and that mating is at random within dogs. We can thus infer that the parasite is frequently transported over great distances. Even so, two genetically distinct populations could be identified. Relatedness of worms within dogs were significantly higher than between dogs and together with F-statistics suggests some non-random transmission of parasites between hosts. While mating is random within a host, parasites from a host are more likely to be related and hence an increase in homozygosity is seen. The implications of this genetic structure on parasite control are considered. en_ZA
dc.description.department Biochemistry en_ZA
dc.description.department Genetics en_ZA
dc.description.department Microbiology and Plant Pathology en_ZA
dc.description.department Paraclinical Sciences en_ZA
dc.description.embargo 2019-07-15
dc.description.librarian hj2018 en_ZA
dc.description.sponsorship The Animal and Zoonotic Diseases Institutional Research Theme at the University of Pretoria and in part by a number of grants from the National Research Foundation of South Africa (UID: 78566 (NRF RISP grant for the ABI3500) and grant number 80678 to PdW and 77256 to JMG). en_ZA
dc.description.uri http://www.elsevier.com/locate/vetpar en_ZA
dc.identifier.citation Greeff, J.M., Reid, K., Gagjee, J.R. et al. 2018, 'Population genetic structure of the parasitic nematode Spirocerca lupi in South Africa', Veterinary Parasitology, vol. 258, pp. 64-69. en_ZA
dc.identifier.issn 0304-4017 (print)
dc.identifier.issn 1873-2550 (online)
dc.identifier.other 10.1016/j.vetpar.2018.06.007
dc.identifier.uri http://hdl.handle.net/2263/66346
dc.language.iso en en_ZA
dc.publisher Elsevier en_ZA
dc.rights © 2018 Elsevier B.V. All rights reserved. Notice : this is the author’s version of a work that was accepted for publication in Veterinary Parasitology. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. A definitive version was subsequently published in Veterinary Parasitology, vol. 258, pp. 64-69, 2018. doi : 10.1016/j.vetpar.2018.06.007. en_ZA
dc.subject Canids en_ZA
dc.subject Gene flow en_ZA
dc.subject Microsatellites en_ZA
dc.subject F-statistics en_ZA
dc.subject Population structure en_ZA
dc.subject Relatedness en_ZA
dc.subject South Africa (SA) en_ZA
dc.subject Spirocerca lupi nematodes en_ZA
dc.subject Spirocerca lupi worms en_ZA
dc.subject Worms en_ZA
dc.subject Animal experiment en_ZA
dc.subject Population genetic structure en_ZA
dc.subject Parasite control en_ZA
dc.subject Microsatellite markers en_ZA
dc.subject Mating en_ZA
dc.subject Homozygosity en_ZA
dc.subject Genetic association en_ZA
dc.subject Genetic analysis en_ZA
dc.subject Gene mutation en_ZA
dc.title Population genetic structure of the parasitic nematode Spirocerca lupi in South Africa en_ZA
dc.type Postprint Article en_ZA


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