Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723
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| dc.contributor.author | Wingfield, Brenda D.
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| dc.contributor.author | Ambler, Jon M.
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| dc.contributor.author | Coetzee, Martin Petrus Albertus
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| dc.contributor.author | De Beer, Z. Wilhelm
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| dc.contributor.author | Duong, Tuan A.
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| dc.contributor.author | Joubert, Fourie
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| dc.contributor.author | Hammerbacher, Almuth
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| dc.contributor.author | McTaggart, Alistair R.
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| dc.contributor.author | Naidoo, Kershney
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| dc.contributor.author | Nguyen, Hai D.T.
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| dc.contributor.author | Ponomareva, Ekaterina
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| dc.contributor.author | Santana, Quentin S.
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| dc.contributor.author | Seifert, Keith A.
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| dc.contributor.author | Steenkamp, Emma Theodora
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| dc.contributor.author | Trollip, Conrad
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| dc.contributor.author | Van der Nest, Magrieta Aletta
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| dc.contributor.author | Visagie, Cobus M.
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| dc.contributor.author | Wilken, Pieter Markus
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| dc.contributor.author | Wingfield, Michael J.
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| dc.contributor.author | Yilmaz, Neriman
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| dc.date.accessioned | 2017-02-21T05:42:28Z | |
| dc.date.available | 2017-02-21T05:42:28Z | |
| dc.date.issued | 2016-06-21 | |
| dc.description.abstract | The genomes of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica, and Penicillium freii DAOMC 242723 are presented in this genome announcement. These six genomes are from plant pathogens and otherwise economically important fungal species. The genome sizes range from 21 Mb in the case of Ceratocystiopsis minuta to 58 Mb for the basidiomycete Armillaria fuscipes. These genomes include the first reports of genomes for the genus Endoconidiophora. The availability of these genome data will provide opportunities to resolve longstanding questions regarding the taxonomy of species in these genera. In addition these genome sequences through comparative studies with closely related organisms will increase our understanding of how these pathogens cause disease. | en_ZA |
| dc.description.department | Biochemistry | en_ZA |
| dc.description.department | Forestry and Agricultural Biotechnology Institute (FABI) | en_ZA |
| dc.description.department | Genetics | en_ZA |
| dc.description.department | Microbiology and Plant Pathology | en_ZA |
| dc.description.librarian | am2017 | en_ZA |
| dc.description.sponsorship | Genome sequencing of Penicillium freii DAOMC 242723 was funded by Growing Forward 2 funding from Agriculture & Agri-Food Canada, with additional support from Canadian Safety and Security Programme grant CRTI 09-462RD/CSSP 30vv01. The genome sequencing of the species Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola and E. polonica were financed by the University of Pretoria, the Department of Science and Technology (DST)/National Research Foundation (NRF) Centre of Excellence in Tree Health Biotechnology (CTHB), and the Genomics Research Institute (University of Pretoria). This work is based on the research supported in part by a number of grants from the National Research Foundation of South Africa (including Grant specific unique reference number (UID) 83924 and 87332). | en_ZA |
| dc.description.uri | http://www.imafungus.org | en_ZA |
| dc.identifier.citation | Wingfield, BD, Ambler, JM, Coetzee, MPA, De Beer, ZW, Duong, TA, Joubert, F, Hammerbacher, A, McTaggart, AR, Naidoo, K, Nguyen, HDT, Ponomareva, E, Santana, QS, Seifert, KA, Steenkamp, ET, Trollip, C, Van der Nest, MA, Visagie, CM, Wilken, PM, Wingfield, MJ & Yilmaz, N 2016, 'Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723', IMA Fungus, vol. 7, no. 1, pp. 217-227. | en_ZA |
| dc.identifier.issn | 2210-6340 (print) | |
| dc.identifier.issn | 2210-6359 (online) | |
| dc.identifier.other | 10.5598/imafungus.2016.07.01.11 | |
| dc.identifier.uri | http://hdl.handle.net/2263/59120 | |
| dc.language.iso | en | en_ZA |
| dc.publisher | International Mycological Association | en_ZA |
| dc.rights | © 2016 International Mycological Association | en_ZA |
| dc.subject | Armillaria root rot | en_ZA |
| dc.subject | Grain spoilage | en_ZA |
| dc.subject | Insect vectored fungi | en_ZA |
| dc.subject | Sap stain fungus | en_ZA |
| dc.subject | Sugarcane root rot | en_ZA |
| dc.title | Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723 | en_ZA |
| dc.type | Article | en_ZA |
