Forestry and Agricultural Biotechnology Institute (FABI)

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Forestry and Agricultural Biotechnology Institute (FABI)

 

FABI, the Forestry and Agricultural Biotechnology Institute, at the University of Pretoria, is a post-graduate research institute that was established in 1997, based on a recognition that the future of forestry and agriculture in South Africa will strongly depend on the incorporation of new and emerging technologies into these industries. Major opportunities for these industries have emerged in recent times, from the applications of biotechnology and bioinformatics, amongst many others. FABI scientists undertake goal-directed research, in partnership with major players in the forestry and agricultural sectors in South Africa and in so doing, promote both human capital and industrial development in the country.

Being based at the University of Pretoria provides FABI with the capacity to build future human resources in biotechnology, that are crucial to the future of forestry and agriculture in South Africa. It also enables collaboration and linkage with the majority of statutory bodies undertaking research in the plant and animal sciences. Additional value comes from training grants, participation of students in research programmes, and an enormous human and technological resource associated with this University.

Staff at the University of Pretoria linked to FABI have also had long-term associations with the fruit tree industry as well as with many other programmes linked to agricultural and forestry crops. Since its establishment, FABI has grown rapidly. FABI is made up of about 180 people including, approximately 15 academic staff, 100+ postgraduate (Hons, MSc, PhD) students, postdoctoral fellows, research visitors, and a small core of technical and support staff. Approximately 30 languages are spoken by members of the FABI Team, illustrating a remarkably multinational and multicultural group.

Visit the FABI website at : http://www.fabinet.up.ac.za.

FABI accommodates students from the Departments of Biochemistry, Chemistry , Genetics, Microbiology and Plant Pathology , Plant Production and Soil Science , Plant Science, and Zoology and Entomology.

Collections in this community

Recent Submissions

  • Van der Nest, Magrieta Aletta; Steenkamp, Emma Theodora; De Vos, Lieschen; Wienk, Raven; Swart, Velushka; Van den Berg, Noelani (Taylor and Francis Group, 2024)
    The mitochondrial genome of Dematophora necatrix is 121,350 base pairs in length with a GþC content of 30.19%. Phylogenetic analysis showed that D. necatrix grouped with other members of the Xylariaceae, with which its ...
  • Aylward, Janneke; Marincowtiz, Seonju; Basson, Renier Johannes; Rippon, William; Wingfield, Michael J.; Roets, Francois (Elsevier, 2024-12)
    Over the past two decades, numerous Geosmithia fungi have been isolated from the bodies and galleries of wood–boring beetles. However, this genus of asexual Sordariomycetes remains taxonomically and ecologically understudied, ...
  • Vilanova, Laura; Caballol, Maria; Zhang, Ke; Olson, Åke; Barnes, Irene; Wingfield, Michael J.; Oliva, Jonas (Elsevier, 2024-12)
    Diplodia sapinea is the causal agent of Diplodia shoot blight, an emerging disease affecting pine forests world wide. The range expansion of this pathogen in northern Europe has been suggested to be partially facilitated ...
  • Harvey, Aaron Thomas; Van den Berg, Noelani; Swart, Velushka (Frontiers Media, 2024-11)
    Wall-associated kinases (WAKs) and WAK-likes (WAKLs) are transmembrane pectin receptors which have seen rising interest in recent years due to their roles in stress responses and developmental pathways. Consequently, the ...
  • Notununu, Iviwe; Moleleki, Lucy N.; Roopnarain, Ashira; Adeleke, Rasheed Adegbola (Frontiers Media, 2024-12)
    Maize (Zea mays L.), a key staple crop in Sub-Saharan Africa, is particularly vulnerable to concurrent drought and heat stress, which threatens crop yield and food security. Plant growth-promoting rhizobacteria (PGPR) ...
  • Rodriguez-R, Luis M.; Conrad, Roth E.; Viver, Tomeu; Feistel, Dorian J.; Lindner, Blake G.; Lindner, Blake G.; Venter, S.N. (Stephanus Nicolaas); Orellana, Luis H.; Amann, Rudolf I.; Rossello-Mora, Ramon; Konstantinidis, Konstantinos T. (American Society for Microbiology, 2024-01)
    Large-scale surveys of prokaryotic communities (metagenomes), as well as isolate genomes, have revealed that their diversity is predominantly organized in sequence-discrete units that may be equated to species. Specifically, ...
  • Ratsoma, Manchela Francinah; Mokoena, Nthabiseng Z.; Santana, Quentin C.; Wingfield, Brenda D.; Steenkamp, Emma Theodora; Motaung, Thabiso Eric (Wiley, 2024-04)
    The capacity to form biofilms is a common trait among many microorganisms present on Earth. In this study, we demonstrate for the first time that the fatal pine pitch canker agent, Fusarium circinatum, can lead a biofilm-like ...
  • Ratsoma, Manchela Francinah; Santana, Quentin C.; Wingfield, Brenda D.; Steenkamp, Emma Theodora; Motaung, Thabiso Eric (Elsevier, 2025-03)
    Organisms from all kingdoms of life release membrane vesicles, which are tiny, spherical structures made of a lipid bilayer. These vesicles carry out several functions, such as forming new cell membranes, removing waste ...
  • Stastny, Michael; Corley, Juan C.; Allison, Jeremy D. (Wiley, 2025)
    Globalization is increasing the threat of invasive forest insects to ecosystems. Control efforts against the same pest species progressively occur across distant jurisdictions as integrated pest management (IPM) programs ...
  • Le Roux, Marlon-Schylor L.; Kunert, Karl J.; Cullis, Christopher A.; Botha, Anna-Maria (Wiley, 2024-11)
    Currently, approximately 4.5 billion people in developing countries consider bread wheat (Triticum aestivum L.) as a staple food crop, as it is a key source of daily calories. Wheat is, therefore, ranked the second most ...
  • Balocchi, Felipe; Sanfuentes, Eugenio A. (Wiley, 2024-12)
    Scotch broom (Cytisus scoparius) and French broom (Genista monspessulana) are two woody legumes native to Europe and North Africa that have become invasive in different countries around the world. In Chile, they are among ...
  • Sisay, Birhanu; Subramanian, Sevgan; Weldon, Christopher William; Kruger, Kerstin; Khamis, Fathiya; Tefera, Tadele; Torto, Baldwyn; Tamiru, Amanuel (Elsevier, 2024-02)
    The fall armyworm (FAW), Spodoptera frugiperda (J. E. Smith), is a damaging crop pest that has recently invaded and established across Africa from its native tropical and subtropical regions of the Americas. To develop ...
  • Hough, Bianca; Wingfield, Michael J.; Read, David Alan (Springer, 2024-12)
    Mycoviruses pervade the fungal kingdom, yet their diversity within various fungal families and genera remains largely unexplored. In this study, 10 publicly available fungal transcriptomes from Ceratocystidaceae were ...
  • Balocchi, Felipe; Wingfield, Michael J.; Paap, Trudy (Wiley, 2024-12)
    Canary Island date palm, Phoenix canariensis, is a popular ornamental species commonly planted in urban areas worldwide, including South Africa. In November 2023, symptoms typical of Fusarium wilt were detected on ornamental ...
  • Singh, Ashmika; Misser, Shristi; Allam, Mushal; Chan, Wai Yin; Ismail, Arshad; Munhenga, Givemore; Oliver, Shüné V. (MDPI, 2024-10-21)
    Anopheles arabiensis is a highly adaptable member of the An. gambiae complex. Its flexible resting behaviour and diverse feeding habits make conventional vector control methods less effective in controlling this species. ...
  • Chen, Chia-Yu; Chan, Wai Yin; Ismail, Arshad; Oliver, Shune V. (MDPI, 2024-04-13)
    The mosquito microbiota is a critical determinant of mosquito life history. It is therefore a target for novel vector control strategies like paratransgenesis. However, the microbiota in Anopheles funestus, a major African ...
  • Price, Jenna-Lee; Visagie, Cobus M.; Meyer, Hannalien; Yilmaz, Neriman (MDPI, 2024-02-08)
    Maize production in South Africa is concentrated in its central provinces. The Eastern Cape contributes less than 1% of total production, but is steadily increasing its production and has been identified as a priority ...
  • Costa, M.M.; Sandoval-Denis, M.; Moreira, G.M.; Kandemir, H.; Kermode, A.; Buddie, A.G.; Ryan, M.J.; Becker, Y.; Yurkov, A.; Maier, W.; Groenewald, J.Z.; Pfenning, L.H.; Crous, Pedro W. (Westerdijk Fungal Biodiversity Institute, 2024-09-26)
    The Fusarium lateritium species complex (FLSC) currently comprises 11 phylogenetic species, including accepted names such as F. lateritium, F. sarcochroum, and F. stilboides, which have mostly been reported in association ...
  • Bhunjun, C.S.; Chen, Y.J.; Phukhamsakda, C.; Boekhout, T.; Groenewald, J.Z.; McKenzie, E.H.C.; Francisco, E.C.; Frisvad, J.C.; Groenewald, M.; Hurdeal, V.G.; Luangsa-ard, J.; Perrone, G.; Visagie, Cobus M.; Bai, F.Y.; Błaszkowski, J.; Braun, U.; De Souza, F.A.; De Queiroz, M.B.; Dutta, A.K.; Gonkhom, D.; Goto, B.T.; Guarnaccia, V.; Hagen, F.; Houbraken, J.; Lachance, M.A.; Li, J.J.; Luo, K.Y.; Magurno, F.; Mongkolsamrit, S.; Robert, V.; Roy, N.; Tibpromma, S.; Wanasinghe, D.N.; Wang, D.Q.; Wei, D.P.; Zhao, C.L.; Aiphuk, W.; Ajayi-Oyetunde, O.; Arantes, T.D.; Araujo, J.C.; Begerow, D.; Bakhshi, M.; Barbosa, R.N.; Behrens, F.H.; Bensch, K.; Bezerra, J.D.P.; Bilanski, P.; Bradley, C.A.; Bubner, B.; Burgess, T.I.; Buyck, B.; Cadez, N.; Cai, L.; Calaca, F.J.S.; Campbell, L.J.; Chaverri, P.; Chen, Y.Y.; Chethana, K.W.T.; Coetzee, B.; Costa, M.M.; Chen, Q.; Custodio, F.A.; Dai, Y.C.; Damm, U.; Santiago, A.L.C.M.A.; De Miccolis Angelini, R.M.; Dijksterhuis, J.; Dissanayake, A.J.; Doilom, M.; Dong, W.; Alvarez-Duarte, E.; Fischer, M.; Gajanayake, A.J.; Gene, J.; Gomdola, D.; Gomes, A.A.M.; Hausner, G.; He, M.Q.; Hou, L.; Iturrieta-Gonzalez, I.; Jami, F.; Jankowiak, R.; Jayawardena, R.S.; Kandemir, H.; Kiss, L.; Kobmoo, N.; Kowalski, T.; Landi, L.; Lin, C.G.; Liu, J.K.; Liu, X.B.; Loizides, M.; Luangharn, T.; Maharachchikumbura, S.S.N.; Makhathini Mkhwanazi, G.J.; Manawasinghe, I.S.; Marin-Felix, Y.; McTaggart, A.R.; Moreau, P.A.; Morozova, Q.V.; Mostert, L.; Osiewacz, H.D.; Pem, D.; Phookamsak, R.; Pollastro, S.; Pordel, A.; Poyntner, C.; Phillips, A.J.L.; Phonemany, M.; Promputtha, I.; Rathnayaka, A.R.; Rodrigues, A.M.; Romanazzi, G.; Rothmann, L.; Salgado-Salazar, C.; Sandoval-Denis, M.; Saupe, S.J.; Scholler, M.; Scott, P.; Shivas, R.G.; Silar, P.; Silva-Filho, A.G.S.; Souza-Motta, C.M.; Spies, C.F.J.; Stchigel, A.M.; Sterflinger, K.; Summerbell, R.C.; Svetasheva, T.Y.; Takamatsu, S.; Theelen, B.; Theodoro, R.C.; Thines, M.; Thongklang, N.; Torres, R.; Turchetti, B.; Van den Brule, T.; Wang, X.W.; Wartchow, F.; Welti, S.; Wijesinghe, S.N.; Wu, F.; Xu, R.; Yang, Z.L.; Yilmaz, Neriman; Yurkov, A.; Zhao, L.; Zhao, R.L.; Zhou, N.; Hyde, K.D. (Westerdijk Fungal Biodiversity Institute, 2024-06)
    The global diversity of fungi has been estimated between 2 to 11 million species, of which only about 155 000 have been named. Most fungi are invisible to the unaided eye, but they represent a major component of biodiversity ...
  • Visagie, Cobus M.; Yilmaz, Neriman; Kocsube, S.; Frisvad, J.C.; Hubka, V.; Samson, R.A.; Houbraken, J. (Westerdijk Fungal Biodiversity Institute, 2024-03)
    The order Eurotiales is diverse and includes species that impact our daily lives in many ways. In the past, its taxonomy was difficult due to morphological similarities, which made accurate identification of species ...

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